STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CPR2F-box domain-containing protein. (297 aa)    
Predicted Functional Partners:
A0A0E0EFQ7
Uncharacterized protein.
  
 
  0.621
A0A0E0EPV5
Uncharacterized protein.
  
 
  0.613
A0A0E0E0M8
FAS1 domain-containing protein.
  
 
  0.612
A0A0E0F1Z2
Uncharacterized protein.
  
 
  0.610
A0A0E0C4N5
PORR domain-containing protein.
  
 
  0.607
A0A0E0ET59
FAS1 domain-containing protein.
  
 
  0.582
A0A0E0F0U0
AAI domain-containing protein.
  
 
  0.581
A0A0E0F766
AAI domain-containing protein.
  
 
  0.579
A0A0E0EL38
BURP domain-containing protein.
  
 
  0.572
A0A0E0BX01
Uncharacterized protein.
  
 
  0.563
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.