STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CPR6AP2/ERF domain-containing protein. (260 aa)    
Predicted Functional Partners:
A0A0E0C5X7
Dof-type domain-containing protein.
  
     0.503
A0A0E0DK71
Dof-type domain-containing protein.
  
     0.487
A0A0E0EML4
Dof-type domain-containing protein.
  
     0.486
A0A0E0CEE1
AP2/ERF domain-containing protein.
  
     0.485
A0A0E0C7Y1
Dof-type domain-containing protein.
  
     0.480
A0A0E0DHB4
Uncharacterized protein.
  
     0.480
A0A0E0EMY7
Dof-type domain-containing protein.
  
     0.477
A0A0E0CQX3
Dof-type domain-containing protein.
  
     0.476
A0A0E0E0M5
Dof-type domain-containing protein.
  
     0.474
A0A0E0ET52
Dof-type domain-containing protein.
  
     0.474
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.