STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CQ00Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
A0A0E0D918
Uncharacterized protein.
   
 
  0.923
A0A0E0C0S5
Uncharacterized protein.
   
   0.815
A0A0E0CUD5
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.772
A0A0E0EFJ1
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.768
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
    
 
 0.750
A0A0E0CYG5
Uncharacterized protein.
   
 
 0.744
A0A0E0CEJ8
Uncharacterized protein.
    
 
 0.732
A0A0E0E5F7
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.727
A0A0E0CSS1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.721
A0A0E0EFL1
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
 0.713
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.