STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CS75Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1032 aa)    
Predicted Functional Partners:
A0A0E0E7T2
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.987
A0A0E0FBT4
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.987
A0A0E0DMI2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.949
A0A0E0ESD2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 0.949
A0A0E0CNL9
Lysine--tRNA ligase.
  
 0.927
A0A0E0D3B6
Lysine--tRNA ligase.
  
 0.925
A0A0E0BW77
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.915
A0A0E0E2D4
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.911
A0A0E0E8N4
Uncharacterized protein.
  
 0.911
A0A0E0ERQ4
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.911
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.