STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CSJ8RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (390 aa)    
Predicted Functional Partners:
A0A0E0EPD7
RPOLD domain-containing protein.
    
 0.952
A0A0E0CY48
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.947
A0A0E0EWD6
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.947
A0A0E0CDW9
RPOL4c domain-containing protein.
    
 0.906
A0A0E0C8B1
TFIIF_beta_N domain-containing protein.
    
 0.879
A0A0E0DTQ7
TFIIF_beta domain-containing protein.
    
 0.879
A0A0E0DK44
Uncharacterized protein.
    
 0.878
A0A0E0DMB4
SHS2_Rpb7-N domain-containing protein.
    
 0.878
A0A0E0DR60
Uncharacterized protein.
    
 0.878
A0A0E0D3B2
Uncharacterized protein.
   
 0.849
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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