STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CSS4Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
A0A0E0EBS2
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.689
A0A0E0CKC3
Uncharacterized protein.
    
 0.638
A0A0E0D5E8
Uncharacterized protein.
    
 0.638
A0A0E0DX27
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
    
 0.638
A0A0E0C4N8
Uncharacterized protein.
  
 
  0.571
A0A0E0CX40
t-SNARE coiled-coil homology domain-containing protein.
    
  0.546
A0A0E0EGY2
Uncharacterized protein.
  
 
  0.530
A0A0E0C3H8
Uncharacterized protein.
  
 
  0.528
A0A0E0BZQ5
NmrA domain-containing protein.
    
 0.527
A0A0E0BZ54
Uncharacterized protein.
  
 
  0.518
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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