STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CTP2PPC domain-containing protein. (364 aa)    
Predicted Functional Partners:
A0A0E0CTP1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.587
A0A0E0DQ79
DUF569 domain-containing protein.
  
 
  0.544
A0A0E0CJ31
Uncharacterized protein.
  
 
  0.527
A0A0E0CJ30
Uncharacterized protein.
  
 
  0.524
A0A0E0E8B5
TAXi_N domain-containing protein.
  
 
  0.519
A0A0E0CQR7
NAC domain-containing protein.
  
 
  0.517
A0A0E0E5N4
TFIIS N-terminal domain-containing protein.
  
 
  0.505
A0A0E0DL48
DUF569 domain-containing protein.
  
 
  0.498
A0A0E0E7E2
LOB domain-containing protein.
  
 
  0.493
A0A0E0F671
Uncharacterized protein.
  
 
  0.492
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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