STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CYB0GTD-binding domain-containing protein. (934 aa)    
Predicted Functional Partners:
A0A0E0C0B7
Uncharacterized protein.
  
 
  0.602
A0A0E0D9X1
Uncharacterized protein.
  
 
  0.589
A0A0E0EI46
NAC domain-containing protein.
  
 
  0.585
A0A0E0DLT9
Uncharacterized protein.
  
 
  0.578
A0A0E0DX60
Uncharacterized protein.
  
 
  0.568
A0A0E0DFU9
Uncharacterized protein.
  
 
  0.566
A0A0E0D600
Uncharacterized protein.
  
 
  0.561
A0A0E0EIE6
Uncharacterized protein.
  
 
  0.554
A0A0E0F973
Uncharacterized protein.
  
 
  0.554
A0A0E0DH46
Uncharacterized protein.
  
 
  0.547
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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