STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0D245Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
A0A0E0D785
Uncharacterized protein.
  
     0.541
A0A0E0CMP6
Uncharacterized protein.
  
     0.536
A0A0E0CH56
Uncharacterized protein.
  
     0.534
A0A0E0CTQ0
Uncharacterized protein.
  
     0.534
A0A0E0DFU9
Uncharacterized protein.
  
     0.525
A0A0E0D9X1
Uncharacterized protein.
  
     0.520
A0A0E0C3Z1
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.511
A0A0E0DF80
Uncharacterized protein.
  
     0.511
A0A0E0CLD9
Uncharacterized protein.
  
     0.510
A0A0E0D988
LEA_2 domain-containing protein.
  
     0.508
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.