STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0D570Uncharacterized protein. (493 aa)    
Predicted Functional Partners:
A0A0E0DTU4
Uncharacterized protein.
    
 0.503
A0A0E0BZF7
Uncharacterized protein.
    
 0.457
A0A0E0CE12
Uncharacterized protein.
    
 0.457
A0A0E0CJL8
Uncharacterized protein.
    
 0.457
A0A0E0CRC4
Uncharacterized protein.
    
 0.457
A0A0E0CTM7
Uncharacterized protein.
    
 0.457
A0A0E0DZJ5
Uncharacterized protein.
    
 0.457
A0A0E0C8L6
Uncharacterized protein.
  
     0.423
A0A0E0DIC6
Uncharacterized protein.
  
     0.423
A0A0E0EHJ6
Copine domain-containing protein.
  
     0.411
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.