STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0D5B6eRF1_1 domain-containing protein. (523 aa)    
Predicted Functional Partners:
A0A0E0EY80
Uncharacterized protein.
   
 
 0.982
A0A0E0CK42
Tr-type G domain-containing protein.
   
 0.980
A0A0E0C164
Ubiquitin-like domain-containing protein.
   
  0.860
A0A0E0EMX3
Ribosomal_L2_C domain-containing protein.
  
 0.842
A0A0E0EW67
Ribosomal_S10 domain-containing protein.
  
 0.834
A0A0E0D8Y0
MTS domain-containing protein.
    
 0.814
A0A0E0EHH4
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.783
A0A0E0DNY8
WD_REPEATS_REGION domain-containing protein.
   
 
 0.779
A0A0E0C9Y4
Uncharacterized protein.
  
 0.773
A0A0E0ESU3
Uncharacterized protein.
  
 0.773
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.