STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0DEV1Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (916 aa)    
Predicted Functional Partners:
A0A0E0D7D8
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.944
A0A0E0CDS6
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.917
A0A0E0FBV3
Uncharacterized protein.
    
 0.899
A0A0E0F2I0
Lipase_3 domain-containing protein.
    
 0.879
A0A0E0CI08
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.877
A0A0E0ENB7
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
  
 
0.873
A0A0E0CXE3
Uncharacterized protein.
   
 
 0.869
A0A0E0D5G2
Uncharacterized protein.
     
 0.812
A0A0E0F6G3
Uncharacterized protein.
     
 0.812
A0A0E0D512
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
  
 
0.751
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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