STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0DG42GCFC domain-containing protein. (195 aa)    
Predicted Functional Partners:
A0A0E0CJR3
WD_REPEATS_REGION domain-containing protein.
   
 0.908
A0A0E0CJS5
Uncharacterized protein.
   
 0.871
A0A0E0CZQ1
Uncharacterized protein.
   
 0.871
A0A0E0F644
Uncharacterized protein.
   
 0.871
A0A0E0E3S1
Tr-type G domain-containing protein.
   
 
 0.860
A0A0E0CIF1
Uncharacterized protein.
    
 
 0.834
A0A0E0DMI6
MPN domain-containing protein.
    
 
 0.834
A0A0E0E695
Uncharacterized protein.
    
  0.816
A0A0E0E698
Uncharacterized protein.
    
  0.816
A0A0E0E7V1
Small nuclear ribonucleoprotein-associated protein.
    
   0.798
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.