STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0DLR1Agenet domain-containing protein. (333 aa)    
Predicted Functional Partners:
A0A0E0DQ19
Uncharacterized protein.
    
 
 0.574
A0A0E0DQ54
Uncharacterized protein.
    
 
 0.574
A0A0E0DR00
Glycosyltransferase.
    
 
 0.574
A0A0E0DVP5
Uncharacterized protein.
    
 
 0.574
A0A0E0EVE4
Uncharacterized protein.
    
 
 0.574
A0A0E0EX97
Uncharacterized protein.
    
 
 0.574
A0A0E0F3C8
Uncharacterized protein.
    
 
 0.574
A0A0E0BZF7
Uncharacterized protein.
    
 0.519
A0A0E0CE12
Uncharacterized protein.
    
 0.519
A0A0E0CJL8
Uncharacterized protein.
    
 0.519
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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