STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0DPF4MADS-box domain-containing protein. (218 aa)    
Predicted Functional Partners:
A0A0E0C4Z6
Mitogen-activated protein kinase.
    
 0.432
A0A0E0C5A5
Mitogen-activated protein kinase.
    
 0.432
A0A0E0C5Q3
Mitogen-activated protein kinase.
    
 0.432
A0A0E0CF47
Mitogen-activated protein kinase.
    
 0.432
A0A0E0CFL5
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.432
A0A0E0CZ18
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.432
A0A0E0D6D5
Mitogen-activated protein kinase.
    
 0.432
A0A0E0DLU2
Mitogen-activated protein kinase.
    
 0.432
A0A0E0DUR6
Mitogen-activated protein kinase.
    
 0.432
A0A0E0DUW5
Mitogen-activated protein kinase.
    
 0.432
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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