STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0DW82Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
A0A0E0CS18
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.846
A0A0E0EMC1
Uncharacterized protein.
   
 0.846
A0A0E0EMC3
Uncharacterized protein.
   
 0.846
A0A0E0EBU2
Thioredoxin domain-containing protein.
    
 0.777
A0A0E0DVP6
Uncharacterized protein.
  
 0.643
A0A0E0FA38
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.578
A0A0E0ESN0
Aldedh domain-containing protein.
   
 
  0.568
A0A0E0CAG3
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.560
A0A0E0C075
MoCF_biosynth domain-containing protein.
    
  0.516
A0A0E0CP42
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.515
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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