STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0E126Uncharacterized protein. (1037 aa)    
Predicted Functional Partners:
A0A0E0C618
Uncharacterized protein.
   
 0.936
A0A0E0CJ90
Uncharacterized protein.
    
  0.646
A0A0E0DUU7
SANT domain-containing protein.
  
 
   0.485
A0A0E0DAL3
Uncharacterized protein.
  
 
   0.484
A0A0E0DR85
Uncharacterized protein.
  
     0.462
A0A0E0E2P8
Uncharacterized protein.
  
 
   0.456
A0A0E0DR87
Uncharacterized protein.
  
     0.451
A0A0E0FC55
GRAM domain-containing protein.
  
     0.446
A0A0E0CR48
Bap31 domain-containing protein.
  
     0.445
A0A0E0CQ99
PRONE domain-containing protein.
  
     0.438
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.