STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0E5N0AP2/ERF domain-containing protein. (165 aa)    
Predicted Functional Partners:
A0A0E0CEE1
AP2/ERF domain-containing protein.
  
 
  0.588
A0A0E0ET52
Dof-type domain-containing protein.
  
     0.531
A0A0E0C5X7
Dof-type domain-containing protein.
  
  
  0.530
A0A0E0DK71
Dof-type domain-containing protein.
  
     0.526
A0A0E0D2E8
Uncharacterized protein.
  
 
   0.525
A0A0E0EY48
MATH domain-containing protein.
  
     0.524
A0A0E0CQX3
Dof-type domain-containing protein.
  
     0.522
A0A0E0BYI7
Dof-type domain-containing protein.
  
  
  0.521
A0A0E0C7Y1
Dof-type domain-containing protein.
  
  
  0.520
A0A0E0BXF4
Uncharacterized protein.
  
     0.519
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.