STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0E6S3Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1032 aa)    
Predicted Functional Partners:
A0A0E0C415
Uncharacterized protein.
    
0.462
A0A0E0DX92
Uncharacterized protein.
      
 0.461
A0A0E0E7V1
Small nuclear ribonucleoprotein-associated protein.
    
 0.461
A0A0E0CZA5
Uncharacterized protein.
    
 0.456
A0A0E0CZW6
Uncharacterized protein.
    
 0.456
A0A0E0CGJ9
Sm domain-containing protein.
    
  0.453
A0A0E0D231
Small nuclear ribonucleoprotein G.
    
  0.450
A0A0E0CHP6
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.447
A0A0E0CXS4
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.447
A0A0E0CDE2
Small nuclear ribonucleoprotein Sm D2.
    
 0.444
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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