STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0E7P3F-box domain-containing protein. (436 aa)    
Predicted Functional Partners:
A0A0E0F9T0
F-box domain-containing protein.
  
 
  0.584
A0A0E0CCW8
NAC domain-containing protein.
  
 
  0.541
A0A0E0E8U8
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
 
   0.541
A0A0E0ELA6
Uncharacterized protein.
  
 
   0.541
A0A0E0CQR7
NAC domain-containing protein.
  
 
  0.536
A0A0E0C3M3
Uncharacterized protein.
  
     0.534
A0A0E0C5S0
Homeobox domain-containing protein.
  
   0.532
A0A0E0FBA5
Uncharacterized protein.
  
  0.529
A0A0E0EXU3
NAC domain-containing protein.
  
 
  0.523
A0A0E0F704
AAI domain-containing protein.
  
     0.519
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.