STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0EDX5cobW domain-containing protein. (247 aa)    
Predicted Functional Partners:
A0A0E0FCF3
Uncharacterized protein.
  
 
 0.805
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
 
 0.804
A0A0E0DKQ8
Uncharacterized protein.
  
  
 0.630
A0A0E0ECR9
Uncharacterized protein.
  
  
 0.630
A0A0E0C525
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
  
 0.593
A0A0E0DSA8
Uncharacterized protein.
  
  
 0.563
A0A0E0DTU1
Uncharacterized protein.
  
  
 0.563
A0A0E0CZU2
DUF3479 domain-containing protein.
  
  
 0.560
A0A0E0EFH6
Uncharacterized protein.
  
  
 0.560
A0A0E0CV36
tRNA-synt_1e domain-containing protein.
  
  
 0.553
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.