STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ERC4ABC transporter domain-containing protein. (897 aa)    
Predicted Functional Partners:
A0A0E0EMR5
Uncharacterized protein.
    
 0.642
A0A0E0CJ90
Uncharacterized protein.
  
 0.641
A0A0E0DPC1
Uncharacterized protein.
  
 
 0.541
A0A0E0EAV6
Uncharacterized protein.
  
 
 0.541
A0A0E0EAV7
Uncharacterized protein.
  
 
 0.541
A0A0E0C232
Uncharacterized protein.
     
 0.521
A0A0E0C234
Uncharacterized protein.
     
 0.521
A0A0E0C235
Uncharacterized protein.
     
 0.521
A0A0E0DW90
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
     
 0.521
A0A0E0EUE0
DHQ_synthase domain-containing protein.
     
 0.521
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.