STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ET25Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
A0A0E0EK62
Sec8_exocyst domain-containing protein.
    
 0.757
A0A0E0F154
Uncharacterized protein.
    
 0.756
A0A0E0D3V7
Sec3-PIP2_bind domain-containing protein.
    
 0.748
A0A0E0DE66
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.744
A0A0E0CRJ4
Uncharacterized protein.
    
 0.742
A0A0E0FAR5
Uncharacterized protein.
    
 0.741
A0A0E0ELM7
Uncharacterized protein.
    
 0.739
A0A0E0CX40
t-SNARE coiled-coil homology domain-containing protein.
   
 0.736
A0A0E0E1Z6
Uncharacterized protein.
  
 
 0.736
A0A0E0BZQ2
Uncharacterized protein.
  
 
 0.730
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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