STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ETJ1Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family. (507 aa)    
Predicted Functional Partners:
A0A0E0C3B4
Cupin_2 domain-containing protein.
  
 
 0.800
A0A0E0E4M1
GMC_OxRdtase_N domain-containing protein.
     
 0.670
A0A0E0D691
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.636
A0A0E0CX44
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.628
A0A0E0DEP9
Endoglucanase.
     
 0.608
A0A0E0CFB7
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
    
  0.583
A0A0E0CLJ1
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.575
A0A0E0CL33
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
     
 0.572
A0A0E0CDE0
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.567
A0A0E0DGP0
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.567
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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