STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0F494PDZ domain-containing protein. (138 aa)    
Predicted Functional Partners:
A0A0E0EJ83
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.703
A0A0E0D9M1
PCI domain-containing protein.
    
 0.687
A0A0E0EN30
TPR_REGION domain-containing protein.
    
 0.664
A0A0E0DV94
RPN13_C domain-containing protein.
   
 0.655
A0A0E0ETT9
Uncharacterized protein.
    
 0.618
A0A0E0DVF4
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 0.592
A0A0E0C164
Ubiquitin-like domain-containing protein.
    
  0.591
A0A0E0EE72
Uncharacterized protein.
     
 0.585
A0A0E0CV77
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.576
A0A0E0CFL0
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.574
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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