STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0F679BHLH domain-containing protein. (523 aa)    
Predicted Functional Partners:
A0A0E0E4N0
FAS1 domain-containing protein.
  
 
  0.601
A0A0E0CW65
Uncharacterized protein.
  
 
  0.539
A0A0E0C164
Ubiquitin-like domain-containing protein.
    
 
 0.470
A0A0E0DMM0
Uncharacterized protein.
  
   0.465
A0A0E0DYC9
Uncharacterized protein.
  
 
  0.464
A0A0E0DMB0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.454
A0A0E0F1X1
WRKY domain-containing protein.
  
   
 0.453
A0A0E0ED76
NAC domain-containing protein.
  
 
  0.452
A0A0E0DM78
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
 0.444
A0A0E0DHA3
Uncharacterized protein.
    
 0.443
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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