STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0F6P7S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (396 aa)    
Predicted Functional Partners:
A0A0E0D446
Meth_synt_2 domain-containing protein.
  
 0.979
A0A0E0FEL6
Uncharacterized protein.
  
 0.979
A0A0E0FEL7
Uncharacterized protein.
  
 0.979
A0A0E0D663
Uncharacterized protein.
  
 
 0.971
A0A0E0D8P8
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.971
A0A0E0DY71
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.945
A0A0E0DFQ6
Autophagy_act_C domain-containing protein.
  
 
 0.941
A0A0E0ESW2
Aminotran_1_2 domain-containing protein.
  
 0.935
A0A0E0D8Y0
MTS domain-containing protein.
    
 0.933
A0A0E0C8C1
Hcy-binding domain-containing protein.
  
 
 0.923
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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