STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0F9B6GRAS domain-containing protein; Belongs to the GRAS family. (554 aa)    
Predicted Functional Partners:
A0A0E0EJC4
Uncharacterized protein.
  
     0.538
A0A0E0F5Q6
Uncharacterized protein.
  
     0.533
A0A0E0FAW6
Uncharacterized protein.
  
     0.533
A0A0E0DSE3
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.532
A0A0E0D1B1
Uncharacterized protein.
  
     0.531
A0A0E0DUX2
Uncharacterized protein.
  
     0.531
A0A0E0EDD8
Uncharacterized protein.
  
     0.531
A0A0E0EEV2
Uncharacterized protein.
  
     0.531
A0A0E0D224
Uncharacterized protein.
  
     0.530
A0A0E0F610
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.529
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.