STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0FA30Uncharacterized protein. (804 aa)    
Predicted Functional Partners:
A0A0E0D6Y3
Uncharacterized protein.
   
 0.954
A0A0E0DDC4
SWIB domain-containing protein.
    
 0.949
A0A0E0EHN6
Uncharacterized protein; Belongs to the actin family.
    
 0.947
A0A0E0CKA2
Uncharacterized protein.
   
 
 0.884
A0A0E0EUH9
Uncharacterized protein.
   
 
 0.884
A0A0E0E025
Uncharacterized protein.
    
 0.836
A0A0E0CB70
Plus3 domain-containing protein.
    
 0.761
A0A0E0DRJ3
Uncharacterized protein.
    
 0.761
A0A0E0D8F1
Uncharacterized protein.
  
 
 0.747
A0A0E0CFB5
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
  0.695
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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