STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR03682.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
KTR06809.1
Pyridoxamine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.757
KTR05584.1
Tagatose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.704
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.693
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.673
KTR03894.1
General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
   
    0.646
KTR00469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
   
    0.646
KTR05427.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
KTR03681.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
Your Current Organism:
Aureimonas ureilytica
NCBI taxonomy Id: 401562
Other names: A. ureilytica, Aurantimonas ureilytica, Aurantimonas ureilytica Weon et al. 2007, Aureimonas ureilytica (Weon et al. 2007) Rathsack et al. 2011, CIP 109815, DSM 18598, KACC 11607, NBRC 106430, strain 5715S-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.