STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR03430.1Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
KTR06633.1
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.948
KTR03443.1
3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.902
KTR08307.1
FAD-binding monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.801
KTR03437.1
3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.773
KTR05789.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.706
KTR03436.1
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.696
KTR03440.1
3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.689
KTR03441.1
Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.683
KTR06299.1
Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.680
KTR03429.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.671
Your Current Organism:
Aureimonas ureilytica
NCBI taxonomy Id: 401562
Other names: A. ureilytica, Aurantimonas ureilytica, Aurantimonas ureilytica Weon et al. 2007, Aureimonas ureilytica (Weon et al. 2007) Rathsack et al. 2011, CIP 109815, DSM 18598, KACC 11607, NBRC 106430, strain 5715S-12
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