STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR02762.1Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
KTR00311.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.630
KTR03020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.559
KTR05747.1
Alpha,alpha-trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.529
KTR05767.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.529
KTR03894.1
General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
  
 0.519
KTR08044.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
  
  
 0.517
KTR06776.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
  
  
 0.517
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
     
 0.484
KTR08542.1
2,5-didehydrogluconate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
KTR04032.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
Your Current Organism:
Aureimonas ureilytica
NCBI taxonomy Id: 401562
Other names: A. ureilytica, Aurantimonas ureilytica, Aurantimonas ureilytica Weon et al. 2007, Aureimonas ureilytica (Weon et al. 2007) Rathsack et al. 2011, CIP 109815, DSM 18598, KACC 11607, NBRC 106430, strain 5715S-12
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