STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7L9T7RlpA-like double-psi beta-barrel domain. (130 aa)    
Predicted Functional Partners:
A0A0P1BGG9
Microfibrillar-associated protein MFAP1.
   
 0.895
A0A0P1BIZ5
Predicted PRP38-like splicing factor.
   
 0.881
A0A0P1BI37
P-loop containing nucleoside triphosphate hydrolase protein.
   
  0.875
A0A0P1BF08
Zinc finger matrin-type protein.
    
  0.870
A0A0P1B9K6
Splicing coactivator SRm160/300, subunit SRm160 (Contains PWI domain).
   
 0.801
A0A0P1BI84
Cdc5 protein.
   
  0.800
A0A0P1BHL8
mRNA splicing factor/probable chromatin binding snw family nuclear protein.
    
 0.789
A0A0N7LAC3
Uncharacterized conserved protein.
    
  0.787
A0A0P1BNA9
Pre-mrna-splicing factor slt11.
    
 0.782
A0A0P1B9H6
Uncharacterized conserved protein.
    
  0.781
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.