STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7L9U0Polyketide synthase. (1596 aa)    
Predicted Functional Partners:
A0A0P1BCY3
Related to bna2-tryptophan-dioxygenase.
   
 0.804
A0A0P1BFI0
4HBT domain-containing protein.
   
 0.763
A0A0N7L9C3
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 0.718
A0A0P1BIX4
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.644
A0A0N7LBG8
Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes.
  
 0.642
A0A0P1BIV7
Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes.
  
 0.642
A0A0P1BIK4
Uncharacterized protein.
  
 
 0.641
A0A0P1BIL9
Uncharacterized protein.
  
 
 0.641
A0A0P1B7P9
Nonribosomal peptide synthetase 10.
  
 0.638
A0A0P1BDX3
Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes.
  
 0.638
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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