STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7L9Y0Trna isopentenyltransferase. (1100 aa)    
Predicted Functional Partners:
A0A0P1BK99
Uncharacterized conserved protein.
   
 0.984
A0A0P1BNR4
Related to leukotriene-a4 hydrolase.
 
      0.825
A0A0P1BM90
WD repeat protein.
   
    0.822
A0A0P1BN92
Dus-domain-containing protein.
   
  
 0.810
A0A0P1B9G1
Microtubule binding protein ytm1.
   
   0.803
A0A0P1BA92
UNCHARACTERIZED.
   
    0.775
A0A0P1BA52
Protein required for biogenesis of the ribosomal 60S subunit.
   
    0.773
A0A0P1BL98
RNA 3'-terminal phosphate cyclase.
   
    0.762
A0A0P1BEL2
WD40 REPEAT PROTEIN 4.
   
  
 0.758
A0A0P1BPZ0
Trna methyltransferase complex subunit cpd1.
   
  
 0.757
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.