STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7LA03Uncharacterized protein. (956 aa)    
Predicted Functional Partners:
A0A0P1BPN7
Low density lipoprotein receptor.
   
 0.989
A0A0P1BA53
Predicted Golgi transport complex 1 protein.
    
 0.988
A0A0P1BAA7
Uncharacterized conserved protein.
    
 0.988
A0A0P1BEE8
Subunit of cis-Golgi transport vesicle tethering complex-Sec34p.
   
 0.988
A0A0P1BG45
Golgi transport complex COD1 protein.
    
 0.988
A0A0P1BRT3
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.988
A0A0P1BGX2
Uncharacterized conserved protein.
   
 
 0.802
A0A0P1BG00
SNARE protein TLG2/Syntaxin 16; Belongs to the syntaxin family.
   
 
 0.801
A0A0P1BR02
SNARE protein SED5/Syntaxin 5; Belongs to the syntaxin family.
     
 0.795
A0A0P1BLF8
Golgi SNAP receptor complex member.
     
 0.759
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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