STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7LAP8Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A0P1BPH5
SWI-SNF chromatin remodeling complex, Snf5 subunit.
    
 0.881
A0A0P1BE51
Chromatin remodeling factor subunit and related transcription factors.
    
 0.865
A0A0P1BPD5
Related to act1-actin; Belongs to the actin family.
    
 0.863
A0A0P1BSD0
SWI/SNF transcription activation complex subunit.
    
 0.862
A0A0P1BT21
Chromatin remodeling complex RSC, subunit RSC1/Polybromo and related proteins.
    
 0.852
A0A0P1B9F3
RlpA-like double-psi beta-barrel domain.
    
 0.781
A0A0N7L8S9
SWI-SNF chromatin remodeling complex, Snf5 subunit.
    
 0.767
A0A0P1B8H6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.686
A0A0P1BI67
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.686
A0A0P1BJ18
annotation not available
    
 0.686
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.