STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7LAX5RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily. (1235 aa)    
Predicted Functional Partners:
A0A0N7L9H8
IkappaB kinase complex, IKAP component.
   
 0.997
A0A0P1BK66
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.984
A0A0P1BJ73
Elongator complex protein 4.
   
 
 0.956
A0A0P1BMJ5
DPBB_1 domain-containing protein.
   
 
 0.956
A0A0N7L947
RNA polymerase II elongator associated protein.
    
 
 0.847
A0A0P1BM90
WD repeat protein.
   
    0.802
A0A0P1BMP6
Mrna export factor elf1.
   
    0.788
A0A0P1BID2
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
    0.767
A0A0P1BCK3
Zf-csl-domain-containing protein.
    
 
 0.662
A0A0N7LBE5
Unconventional myosin-if.
   
 
 0.590
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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