STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7LB53Predicted hydrolase involved in interstrand cross-link repair. (569 aa)    
Predicted Functional Partners:
A0A0P1BB83
mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit).
   
 0.912
A0A0P1B962
Related to cleavage and polyadenylation specificity factor.
    
 0.899
A0A0P1BG32
mRNA cleavage and polyadenylation factor II complex, subunit PTA1.
   
 0.898
A0A0P1BJH3
Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies; Belongs to the cytochrome P450 family.
 
      0.891
A0A0P1BSX8
DNA-binding subunit of a DNA-dependent protein kinase (Ku80 autoantigen).
    
 0.888
A0A0P1BQJ3
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.882
A0A0N7L9R5
Polyadenylation factor I complex, subunit FIP1.
    
 0.878
A0A0P1BLH0
DNA-binding subunit of a DNA-dependent protein kinase (Ku70 autoantigen).
   
 0.853
A0A0P1BK16
Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2.
    
 0.847
A0A0P1BC28
mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11.
    
 0.825
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.