STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1B8S3Ribosomal rna assembly protein mis3. (708 aa)    
Predicted Functional Partners:
A0A0P1BA35
Duf663-domain-containing protein.
   
 
 0.999
A0A0P1BAC2
Cell adhesion complex protein bystin.
   
 
 0.999
A0A0P1BBD8
Nucleolar protein involved in 40S ribosome biogenesis.
   
 0.999
A0A0P1BD53
rRNA processing protein Rrp5.
   
 0.999
A0A0P1BFY5
Disrupter of silencing SAS10.
   
 0.999
A0A0P1BJK6
Related to emg1-protein required for ribosome biogenesis.
  
 0.999
A0A0P1BM15
DRIM (Down-regulated in metastasis)-like proteins.
   
 0.999
A0A0P1BMS8
Alpha-l rna-binding motif-containing protein.
   
 0.999
A0A0P1BQ87
WD40 repeat protein.
   
 0.999
A0A0P1BRU2
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 0.999
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.