STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1B990FAR1 DNA binding domain. (464 aa)    
Predicted Functional Partners:
A0A0P1BMA6
WD40 repeat protein.
   
 0.796
A0A0P1BDW0
Uncharacterized conserved protein.
   
 0.762
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.758
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.712
A0A0N7L9M4
Calmodulin; Belongs to the calmodulin family.
    
 0.696
A0A0P1BS27
Myosin regulatory light chain cdc4.
    
 0.696
A0A0P1BKS3
Actinin-like protein.
   
 0.673
A0A0P1BP18
Nonmuscle myosin heavy chain b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.663
A0A0P1BGF2
Uncharacterized conserved protein similar to ATP/GTP-binding protein.
   
 0.640
A0A0P1B9G1
Microtubule binding protein ytm1.
   
 0.634
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.