Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0N7L9D7 | A0A0P1B9N1 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Related to app1-actin patch protein. | 0.509 |
A0A0P1B9N1 | A0A0N7L9D7 | Related to app1-actin patch protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.509 |
A0A0P1B9N1 | A0A0P1BC06 | Related to app1-actin patch protein. | Dihydrolipoyl dehydrogenase. | 0.518 |
A0A0P1B9N1 | A0A0P1BC84 | Related to app1-actin patch protein. | Nitrate reductase. | 0.524 |
A0A0P1B9N1 | A0A0P1BCK9 | Related to app1-actin patch protein. | Cytochrome b5; Belongs to the cytochrome b5 family. | 0.524 |
A0A0P1B9N1 | A0A0P1BFH9 | Related to app1-actin patch protein. | Glutathione-disulfide reductase. | 0.514 |
A0A0P1B9N1 | A0A0P1BGL0 | Related to app1-actin patch protein. | PROTEIN MAK32. | 0.509 |
A0A0P1B9N1 | A0A0P1BIK2 | Related to app1-actin patch protein. | Ferredoxin. | 0.600 |
A0A0P1B9N1 | A0A0P1BL84 | Related to app1-actin patch protein. | Delta9-fatty acid desaturase. | 0.710 |
A0A0P1B9N1 | A0A0P1BRK0 | Related to app1-actin patch protein. | SRF-DEPENDENT TRANSCRIPTION REGULATION ASSOCIATED PROTEIN. | 0.509 |
A0A0P1B9N1 | A0A0P1BS99 | Related to app1-actin patch protein. | Beta-lactamase-like. | 0.600 |
A0A0P1BC06 | A0A0P1B9N1 | Dihydrolipoyl dehydrogenase. | Related to app1-actin patch protein. | 0.518 |
A0A0P1BC06 | A0A0P1BC84 | Dihydrolipoyl dehydrogenase. | Nitrate reductase. | 0.682 |
A0A0P1BC06 | A0A0P1BCK9 | Dihydrolipoyl dehydrogenase. | Cytochrome b5; Belongs to the cytochrome b5 family. | 0.682 |
A0A0P1BC84 | A0A0P1B9N1 | Nitrate reductase. | Related to app1-actin patch protein. | 0.524 |
A0A0P1BC84 | A0A0P1BC06 | Nitrate reductase. | Dihydrolipoyl dehydrogenase. | 0.682 |
A0A0P1BC84 | A0A0P1BCK9 | Nitrate reductase. | Cytochrome b5; Belongs to the cytochrome b5 family. | 0.988 |
A0A0P1BC84 | A0A0P1BFH9 | Nitrate reductase. | Glutathione-disulfide reductase. | 0.678 |
A0A0P1BC84 | A0A0P1BIK2 | Nitrate reductase. | Ferredoxin. | 0.957 |
A0A0P1BC84 | A0A0P1BL84 | Nitrate reductase. | Delta9-fatty acid desaturase. | 0.962 |
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