STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BAE6Related to aur1-inositol phosphorylceramide synthase. (520 aa)    
Predicted Functional Partners:
A0A0N7LAT6
Serine palmitoyltransferase.
   
 0.621
A0A0P1B9E8
Serine palmitoyltransferase.
   
 0.607
A0A0P1BIK2
Ferredoxin.
   
 0.600
A0A0P1BS99
Beta-lactamase-like.
   
 0.600
A0A0P1BL84
Delta9-fatty acid desaturase.
    
 0.590
A0A0P1BB84
Predicted membrane protein.
    
   0.541
A0A0N7LAP0
Ribose 5-phosphate isomerase.
  
 
 0.524
A0A0P1BC84
Nitrate reductase.
  
 0.524
A0A0P1BCK9
Cytochrome b5; Belongs to the cytochrome b5 family.
  
 0.524
A0A0N7L9D7
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.519
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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