STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BAE9Amidohydrolase partial. (517 aa)    
Predicted Functional Partners:
A0A0P1BL84
Delta9-fatty acid desaturase.
    
 0.629
A0A0N7LBH4
Lysophospholipase.
    
  0.602
A0A0P1BHE6
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.515
A0A0P1BL80
Probable 25 kd subunit of dna-directed rna polymerases ii and iii.
    
  0.514
A0A0P1BQ45
Rna polymerase ii subunit.
    
  0.514
A0A0P1BC84
Nitrate reductase.
     
 0.491
A0A0P1BCK9
Cytochrome b5; Belongs to the cytochrome b5 family.
     
 0.491
A0A0P1BN80
RNA polymerase II, subunit POLR2C/RPB3.
    
  0.487
A0A0P1BF33
HEPATOMA-DERIVED GROWTH FACTOR-RELATED.
    
 0.481
A0A0P1BIR0
Related to vacuolar atp synthase subunit h.
    
 0.481
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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