STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BAY6Vacuolar protein sorting-associated protein 26. (298 aa)    
Predicted Functional Partners:
A0A0N7LB89
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.969
A0A0P1BKB2
annotation not available
    
 0.965
A0A0N7L978
Membrane coat complex Retromer, subunit VPS35.
   
 0.941
A0A0P1BCD7
Membrane coat complex Retromer, subunit VPS35.
   
 0.941
A0A0P1BAK5
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 17.
    
 
 0.758
A0A0P1B7F7
Ypt/Rab-specific GTPase-activating protein GYP6.
   
 
 0.674
A0A0P1BQP1
annotation not available
    
 
 0.646
A0A0P1BPK2
annotation not available
   
 
 0.612
A0A0N7LA89
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.603
A0A0P1BNQ7
annotation not available
    
 
 0.594
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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