STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BB10Wd40 repeat-like protein. (378 aa)    
Predicted Functional Partners:
A0A0P1B9G8
Nuclear porin.
   
 0.999
A0A0P1BE97
Nuclear pore complex, Nup98 component (Sc Nup145/Nup100/Nup116).
    
 0.999
A0A0P1BGK4
mRNA export factor TAP/MEX67.
    
 0.995
A0A0P1BKK2
Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor.
   
 0.977
A0A0P1BTB2
Ubiquitin-conjugating enzyme.
   
 0.957
A0A0P1BJM7
Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170).
    
 0.911
A0A0P1BDQ4
Nuclear pore complex, p54 component (Sc Nup57).
   
 0.902
A0A0P1BJQ9
Uncharacterized conserved coiled-coil protein.
    
 0.902
A0A0P1BNF6
Nuclear pore protein.
   
 0.890
A0A0P1BM56
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.887
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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