STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BB61Apoptosis antagonizing transcription factor/protein transport protein. (534 aa)    
Predicted Functional Partners:
A0A0P1B8G5
Protein involved in rRNA processing.
   
 
 0.998
A0A0P1BA35
Duf663-domain-containing protein.
   
 
 0.998
A0A0P1BBD8
Nucleolar protein involved in 40S ribosome biogenesis.
   
 
 0.998
A0A0P1BBW3
Pre-rrna-processing protein pno1.
   
 
 0.998
A0A0P1BIC5
Sof1-like rRNA processing protein (Contains WD40 repeats).
   
   0.998
A0A0P1BID2
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 
 0.998
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
A0A0P1BRU2
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 
 0.998
A0A0N7L9I3
Brix-domain-containing protein.
   
   0.997
A0A0P1BDX8
HAT (Half-A-TPR) repeat-containing protein.
   
 
 0.997
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.