STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BCI0Meiosis specific protein SPO22. (770 aa)    
Predicted Functional Partners:
A0A0P1BQR1
Mismatch repair ATPase MSH4 (MutS family).
   
  
 0.602
A0A0P1BHV2
Uncharacterized protein involved in synaptonemal complex formation.
    
 
 0.581
A0A0P1BPK8
HORMA domain.
   
 
 0.526
A0A0P1BF72
DNA mismatch repair protein-MLH1 family.
    
 
 0.458
A0A0P1BL39
DNA mismatch repair protein-MLH3 family.
    
 
 0.458
A0A0N7LAP1
Meiotic recombination protein spo11.
      
 0.420
A0A0P1B815
MUS81.
      
 0.416
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.