STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BCR6PROTEIN TMA23. (223 aa)    
Predicted Functional Partners:
A0A0P1BTC0
Pre-mrna splicing factor.
   
 
 0.968
A0A0P1BRU2
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
   0.964
A0A0P1BAC2
Cell adhesion complex protein bystin.
   
   0.955
A0A0P1BFX0
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.948
A0A0P1BJ92
Protein involved in high osmolarity signaling pathway.
   
   0.947
A0A0P1BPM7
Atp-dependent rna helicase fal1.
   
 
 0.941
A0A0P1BJ39
Protein MAK16; Belongs to the MAK16 family.
   
   0.886
A0A0P1BDG0
Nucleolus protein.
   
   0.807
A0A0P1BG43
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
   0.792
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
   0.789
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.