STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BD33annotation not available (1225 aa)    
Predicted Functional Partners:
A0A0N7L9D5
Uncharacterized protein.
  
  
  0.657
A0A0P1BMI0
Synaptobrevin.
    
 0.631
A0A0N7LB89
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.614
A0A0P1BB89
Related to cytoskeleton assembly control protein.
    
  0.604
A0A0N7LA89
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.585
A0A0P1BPR0
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.555
A0A0N7L978
Membrane coat complex Retromer, subunit VPS35.
   
 
 0.554
A0A0P1BCD7
Membrane coat complex Retromer, subunit VPS35.
   
 
 0.554
A0A0P1BAY6
Vacuolar protein sorting-associated protein 26.
    
 
 0.550
A0A0P1BQ39
AAA ATPase containing von Willebrand factor type A (VWA) domain.
    
 
 0.550
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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